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open
Candida albicans cell
wall as a target of action
for the protein–carbohydrate
fraction from coelomic fluid
of Dendrobaena veneta
Marta J. Fiołka1*, Sylwia Mieszawska1, Paulina Czaplewska2, Aneta Szymańska3,
Katarzyna Stępnik4, Weronika Sofińska‑Chmiel5, Tomasz Buchwald6 & Kinga Lewtak7
The protein–polysaccharide fraction (AAF) isolated from the coelomic fluid of the earthworm
Dendrobaena veneta destroys C. albicans cells by changing their morphology, disrupting cell division,
and leading to cell death. Morphological changes in C. albicans cells induced by treatment with AAF
were documented using DIC, SEM, and AFM. Congo Red staining showed that the fungal wall structure
was changed after incubation with AAF. The effect on C. albicans cell walls was shown by AfM
analysis of the surface roughness of fungal cell walls and changes in the wall thickness were visualized
using Cryo‑SEM. The FTIR analysis of C. albicans cells incubated with AAF indicated attachment of
protein or peptide compounds to the fungal walls. The intact LC–ESI–MS analysis allowed accurate
determination of the masses of molecules present in AAF. As shown by the chromatographic study,
the fraction does not cross biological membranes. The Cryo‑TEM analysis of AAF demonstrated the
ability of smaller subunits to combine into larger agglomerates. AAF is thermally stable, which was
confirmed by Raman spectroscopy. AAF can be considered as a potential antifungal antibiotic with
activity against clinical C. albicans strains.
As shown in numerous reports of world health organizations, recent decades have been characterized by an
increase in the rates of invasive fungal infection. This is mainly related to the growing population at risk of infection, which includes immunocompromised patients with cancers and those with human immunodeficiency virus
HIV. This group also includes patients receiving immunosuppressants after transplants, treated for autoimmune
diseases, and taking such medicines to treat inflammation1.
Candida albicans is a unicellular yeast fungus, which colonizes the mucosal tissues of the oral cavity and
reproductive tract and is a member of the physiological microflora of human guts2. As a commensal, it grows
in the unicellular form in balance with other microorganisms in the human body3. A healthy immune system
prevents C. albicans from increased proliferation, formation of hyphae or pseudohyphae, and in consequence
causing an infection4. Disturbances in the immunity balance caused by invasive treatments like surgery, organ
transplantation, chemotherapy, and antibiotic treatment and by the use of implanted medical devices such as
prostheses, artificial pacemakers, or urinary and venous catheters may result in development of candidiasis2,5,6.
1
Department of Immunobiology, Institute of Biology Sciences, Maria Curie-Skłodowska University, Akademicka
19, 20-033 Lublin, Poland. 2Intercollegiate Faculty of Biotechnology, University of Gdańsk and Medical University
of Gdańsk, Gdańsk, Poland. 3Department of Biomedical Chemistry, Faculty of Chemistry, University of Gdańsk,
Gdańsk, Poland. 4Department of Physical Chemistry, Institute of Chemistry Sciences, Maria Curie-Skłodowska
University, Lublin, Poland. 5Analitycal Laboratory, Institute of Chemistry Sciences, Maria Curie-Skłodowska
University, Lublin, Poland. 6Institute of Material Research and Quantum Engineering, Faculty of Material
Engineering and Technical Physics, Poznań University of Technology, Poznań, Poland. 7Department of Cell
Biology, Institute of Biology Sciences, Maria Curie-Skłodowska University, Lublin, Poland. *email: marta.fiolka@
poczta.umcs.lublin.pl
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Other factors that may promote the growth of C. albicans are the immature defense systems in newborns, in such
conditions as malnutrition, diabetes, burns, and AIDS, or in the elderly with a weakened immune system2,7,8.
Due to these factors, C. albicans infections are common in intensive care units, especially in Europe and the
USA9–12. The ability of the fungus to adhere to both mucosal and synthetic surfaces, develop biofilm, and spread
infections through blood made it one of the most important pathogens causing nosocomial infections3,6,12. With
the growing immunocompromised populations that are more susceptible to infection, the number of patients
developing candidiasis is constantly increasing11. C. albicans is the third most common pathogen causing intensive-care unit infections and the second cause of vulvovaginal candidiasis13. It is isolated most frequently from
samples in urinary tract or glans penis infections7,13. Besides this alarming trend, there is a rising number of C.
albicans strains with resistance to antifungal drugs, e.g. fluconazoles, azoles, and echinocandins2,11.
Given the progression of pathogen resistance to frequently used medicines, the increasing number of sick
patients, and the high mortality, it is necessary to search for new effective drugs14. Recently, more attention has
been paid to the anti-C. albicans activity of drugs derived from plant extracts15. Traditional Chinese medicine
based on the use of herbs for thousands of years can be very helpful in developing new antifungal agents and
strategies for treatment of mycoses16. In the traditional medicine of the Far East, earthworms have occupied a
special place as well. These invertebrates are commonly used in traditional Asian medicine e.g. in China, Vietnam,
Burma, Laos, and Korea. Earthworms are a convenient model for obtaining compounds with antimicrobial, antiviral, and anticancer activity. Until now, studies on the antifungal activity in earthworms have mainly focused on
earthworm preparations in the form of extracts, powders, and pastes, where the activity against fungi is a result
of synergistic action of many ingredients contained therein17–22. Coelomic fluid (CF) isolated from earthworms
with its compounds is a promising agent to be used for candidiasis treatment. Studies on the influence of CF on
yeast cells have shown that it effectively inhibits fungal growth18,23.
Research conducted by Fiołka et al.24 demonstrated that a protein–carbohydrate fraction isolated from Dendrobaena veneta CF showed activity against C. albicans cells. Previous studies showed that the fraction reduced
the metabolic activity of C. albicans strains and caused cell death via apoptosis, i.e. the most desirable type of
cell death that can be induced by an antifungal antibiotic. The fraction showed no cytotoxicity to fibroblasts and
no endotoxicity effect24. In addition, it is a chemically homogeneous fraction and its chemical composition has
been preliminarily characterized. Attempts to separate the AAF fraction were associated with loss of its activity;
therefore, it was analyzed as a total bioactive agent in subsequent studies. The aim of the present study was to
explore the mechanism of a protein–carbohydrate fraction from D. veneta CF on a clinical C. albicans strain and
provide further chemical characterization of the fraction.
Materials and methods
earthworms. The D. veneta earthworms were maintained in the laboratory culture of the Department of
Immunobiology, Maria Curie-Skłodowska University in Lublin. They were kept in containers filled with compost soil at ca. 20 °C in the dark24. The earthworms were fed with boiled vegetables and green tea leaves twice a
week. Adult earthworms were selected for the experiments.
A wild-type Candida albicans clinical isolate,
kindly gifted by Prof. A Kędzia, Department of Oral Microbiology, Medical University of Gdańsk, was examined in YPD liquid poor medium25. AAF was added at different protein concentrations to 150 µL YPD poor
medium with Candida culture (107 CFU from the logarithmic phase in YPD) and streptomycin sulfate (Sigma)
(0.17 mg mL−1). Then, the suspension was completed with YPD poor medium to the final volume up to 250 µL.
The samples were incubated for 48 h at 37 °C with gentle shaking24. After that time, C. albicans cells were analyzed with microscopy techniques.
Microorganism and preparation for microscopy.
Earthworm CF harvesting. The earthworms were taken out from the containers and placed into new ones
filled with cellulose for cleaning their guts for 24 h. Next, they were rinsed with sterile water and drained on
cellulocotton. CF was collected by electrical stimulation (4.5 V) from groups of 10 individuals. CF with coelomocytes was collected in 0.9% NaCl (1500 μL per group). Then, CF was centrifuged at 6000×g for 10 min at 4 °C.
The supernatant from all tubes was sterilized by filtration through 0.22 μm Millipore filters. The cell-free CF was
heated for 10 min at 70 °C. Next, it was transferred to a cellulose membrane bag with cut off points of 12–14 kDa.
The samples were dialyzed against water for 24 h at 4 °C. The fraction obtained (AAF) after the dialysis was
transferred into Eppendorf tubes, lyophilized, and stored at − 20°C24. The Bradford assay (Bio-Rad) was used to
estimate the protein concentration.
DIC microscopy analysis of C. albicans cells. After incubation, C. albicans cells from the control culture and the AAF-treated culture were observed with a microscope (Olympus BX61). Changes in the shape and
structure of the C. albicans cells were documented with the DIC (Differential Interference Contrast) function.
The morphology of the fungal cells was visualized at 60× magnification.
The control and culture cells incubated with the fraction were divided into 4 groups according to their morphology: normal cells, deformed cells, cells with enlarged vacuoles, and hyphae and pseudo-hyphae. All cell
forms, 1000 in each group, were counted using the ImageJ program and the percentages of the individual forms
were represented graphically. Cells were counted from three independent experiments.
congo Red staining of c. albicans cells. The Congo Red stain dyes β-glucans present in the fungal cell
wall, which is manifested by red fluorescence. 2% Congo Red stain (Sigma-Aldrich, catalogue number C6277)
was used in this experiment. After incubation, control and AAF-treated samples were centrifuged at 6000×g at
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room temperature. The supernatant was discarded, and the fungal cells were suspended in 5 μL of sterile TBS
buffer. Next, 3 μL of the fluorochrome were added to each sample and incubated for 3 min at room temperature.
C. albicans cells were observed at excitation wavelength λ = 440 nm with the use of an LSM 5 Pa confocal laser
scanning microscope (Carl Zeiss, Jena, Germany) with the magnification of 1000×. The experiment was repeated
three times.
After Congo red staining of the control C. albicans cells and cells treated with the active fraction, the fluorescence of the red glowing cells was measured. Approximately 100 microscopic images were analyzed for each
sample, both the control sample and samples incubated with 25, 50, and 100 µg mL−1 of the fraction. The experiment was repeated three times. The fluorescence measurement results from individual samples were statistically
analyzed using the Statistica 12.5 program and one-way ANOVA tests with analysis of variance.
SeM analysis of c. albicans cells. The preparation of the control and AAF-treated C. albicans cells for
SEM analysis was started by suspending the fungal cells in a fixative, i.e. 4% glutaraldehyde in 0.1 M phosphate
buffer, pH 7.0. The samples were then incubated with OsO4 and dehydrated in increasing acetone solution concentrations (15%, 30%, 50%, 70%, 100%) by centrifugation at 3000 rpm for 30 min. Next, the samples were
dried for 24 h in a desiccator using silica gel beads and then sputtered with gold using a K550X sputter coater
(Quorum Technologies). The preparations with C. albicans cells were analyzed using a Vega 3 scanning electron
microscope (Tescan) at 30 kV.
AfM analysis of c. albicans cells. The surface of both the control and AAF-treated fungal cells was
measured using NanoScope V AFM (atomic force microscope) in the Peak-Force Quantitative Nanomechanical Mapping Mode (Bruker, Vecco Instruments Inc., Billerica, MA, USA) and NanoScope 8.15 software. The
nominal spring constant of the RTESPA probe (Bruker, Billerica, MA, USA) (silicone tip on the nitride lever)
was 40 N/m.
Cryo‑SEM analysis of C. albicans cells.
The control and AAF-treated C. albicans cells were centrifuged
at 6.000×g for 10 min. The supernatant was then withdrawn and 200 μL of a GH solution (glucose, Na-HEPES,
sterile water) were added to the pellet containing fungal cells. The samples were centrifuged again for 10 min and
the supernatant was discarded. The C. albicans cells prepared in a small amount of the GH solution were transferred and placed in a sublimation chamber. The process was carried out for 12 min at − 92 °C. After this time,
the samples were transferred to the preparation chamber, where they were cut with a special blade and further
analyzed under a scanning electron microscope at 5 kV.
Cryo‑TEM analysis of AAF.
The AAF solution with a protein concentration of 1 mg mL−1 was placed in an
ultrasonic chamber (Pol-Sonic, Poland) for 10 min at 40°. Next, the preparation of the AAF specimen consisted
in vitrification of an aqueous suspension on the TEM grid with holey carbon film (Quantifoil R 2/2; Quantifoil
Micro Tools GmbH, Großlöbichau, Germany). Prior to use, the grids were activated for 15 s in oxygen plasma
using the Femto plasma cleaner (Diener Electronic, Ebhausen, Germany). The samples of AAF were vitrified
by applying a droplet (3 μL) of the suspension to the grid, blotting with filter paper, and immediate freezing
in liquid ethane using a fully automated blotting device Vitrobot Mark IV (FEI Company, Hillsboro, Oregon,
USA). After preparation, the vitrified specimens were kept in liquid nitrogen until they were inserted into the
Cryo-TEM-holder Gatan 626 (Gatan Inc., Pleasanton, USA) providing a sufficiently low temperature (− 178 °C)
during the transfer of the samples to the microscope and during the TEM analyses25. Cryogenic Transmission
Electron Microscopy (Cryo-TEM) images were obtained using a Tecnai F20 X TWIN microscope (FEI Company, Hillsboro, Oregon, USA) equipped with a field emission gun (FEG) operating at the acceleration voltage
of 200 kV. Images were recorded with an Eagle 4k HS camera (FEI Company, USA) and processed with TIA
software (FEI Company, USA).
Fourier transform infrared spectroscopy with attenuated total reflection (FTIR‑ATR). Information about the structure of organic material is provided by characteristic absorption bands describing a
selected functional group of compounds. The position of the absorption bands in FTIR (Fourier transform
infrared spectroscopy) is related to the change in the energy of particles resulting from stretching and deformation vibrations of interconnected atoms26. To investigate the molecular structure of C. albicans before and after
the AAF treatment, FTIR-ATR spectra were recorded using a Thermo Scientific FTIR Nicolet 8700 spectrometer. They were obtained with the use of the ATR method with a diamond crystal in the wave number range of
4000–400 cm−1 and spectral resolution of 4 cm−1. The spectra were recorded directly from the surface of the samples at room temperature. The spectra were subjected to ATR correction, baseline correction, and normalization.
Raman spectroscopy analysis. The effect of temperature on the secondary structure of proteins was
evaluated using a Raman spectroscopy device (Renishaw, UK) equipped with a 785 nm diode laser and a 1200 l/
mm diffraction grating. At the beginning of the measurements, the spectroscope was calibrated using the Raman
band of a silicon reference sample at 520.7 cm−1. Temperature analysis was conducted using Linkam temperature control cells from 23 to 45 °C with 2 °C steps and from 45 to 165 °C with 10 °C steps. Raman spectra of
the proteins were collected each time after temperature stabilization in the range from 200 to 3200 cm−1. The
intensity of Amide I band in the range between 1620 and 1715 cm−1 (labeled in Fig. 12a) was used to determine
the percentage composition of particular secondary structures of proteins. The intensity of bands assigned to the
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alpha helix, beta sheet, beta turn, and random coil protein structures was obtained by the curve-fitting process,
as described in our earlier study24.
Size exclusion chromatography (SEC) analysis of AAF.
4 mg/ml stock solutions in MQ (Milli-Q)grade water were prepared for all four AAF samples. The samples were described according to the numbering
on the test tubes: MF-1, MF-2, MF-3, and MF-4. 10 µL of the stock sample were diluted in 30 µL of PBS buffer
(0.01 M phosphate, 0.0027 M potassium chloride, 0.137 M sodium chloride, pH 7.4) containing 1 mg mL−1
benzamidine hydrochloride as an internal standard. The sample was centrifuged for 2 min at 14 000 rpm and 15
µL of the supernatant were injected through a 10-µL loop onto the gel filtration column (Superdex 75 Increase,
3.2/300, GE Healthcare). The sample was eluted using 50 mM NaPi (Na phosphate) and 150 mM NaCl buffer,
pH 7.5, at 0.1 ml/ml. The elution profile was monitored using absorbance at λ = 280 nm. An LMW Gel Filtration
Calibration Kit from GE Healthcare Life Sciences was used for calibration of the column.
UHpLc analysis of AAf. 10 µL of the stock sample were diluted with 30 µL of 0.1% TFA in water. The
sample was centrifuged for 2 min at 14,000 rpm and 2 or 10 µL of the supernatant were automatically injected
(using an autosampler) onto a UHPLC column (Kinetex 2.6 µm, C8, 100A, 2.1 × 100 mm, Phenomenex). The
sample was eluted using a linear gradient from 5% B in A to 100% B, where A: 0.1% TFA in water and B: 80%
acetonitrile in 0.08% TFA in water. A 15-min gradient and 0.5 ml/min flow were applied. The elution profile was
monitored using a UV–Vis detector at 223 mn.
intact Lc–eSi–MS analysis of AAf. The lyophilized AAF eluate was dissolved in 50 mM ammonium
acetate (pH 7.4), mixed for 5 min, and sonicated for another 5 min. Before MS analysis, the sample was centrifuged for 15 min (15,000 g) and the concentration of proteins (2 mg mL−1) was measured with a UV spectrophotometer (Multiscan Sky, Thermo) using a μDrop Plate.
The LC–MS system consisted of the Ekspert MicroLC 200 Plus System (Eksigent, Redwood City, CA) and a
Triple Tof 5600+ mass spectrometer with a DuoSpray Ion Source (Sciex). The SCIEX Analyst TF 1.7.1 software
controlled the microLC-MS/MS system with the active Intact Protein Mode (IPM). The sample was loaded
onto the column using the CTC Pal Autosampler (CTC Analytics AG, Zwinger, Switzerland) with the injection
of 1µL of sample solution and separated on a 5CA-CL-300, 5 μm, 300 Å, size 0.5 × 150 mm column (Exigent)
using a 77-min gradient (3–90% B, Solvent A 0.1% formic acid in H2O, Solvent B 100% Acetonitrile and 0.1%
formic acid). The flow rate was 20 μl/min. All details of the LC gradient and intact MS method parameters as
well as the final raw data for the intact analysis are available at the MassIVE repository (Computer Science and
Engineering University of California, San Diego, Center for Computational Mass Spectrometry, https://massi
ve.ucsd.edu/ProteoSAFe/static/massive.jsp) under the DOI number https://doi.org/10.25345/C5M10F. The intact
LC–ESI–MS spectrum was analyzed in PeakView (Sciex), and all protein masses were reconstructed with the
Bio Tool Kit micro-application based on a maximum entropy algorithm. Protein reconstruction was done using
an output mass range between 3.000 and 50.000 Da with a step size of 1.
Biopartitioning micellar chromatography (BMc) analysis of AAf. The BMC analysis was carried
out according to the procedure described in the previous paper27. The Shimadzu Vp liquid chromatographic system equipped with an LC 10AT pump, an SPD 10A UV–Viz detector, an SCL 10A system controller, a CTO-10
AS chromatographic oven, and a Rheodyne injector valve with a 20-μL loop was used to obtain chromatographic
data. The Class-Vp program was used to acquire and archive the data.
A stainless-steel C18 endcapped packed reversed-phase column (5 m, 125 mm × 4 mm, I.D., Purospher,
Merck, Darmstadt, Germany) was used. Buffered solutions (pH 7.4) of Brij35 (polyoxyethylene (23) lauryl
ether; Merck, Darmstadt, Germany, p.a.) were used with the following concentrations: 0.04 M, 0.06 M, 0.08 M,
and 0.15 M. 5% v/v isobutanol (POCH SA, Gliwice, Poland, p.a.) was added to each mobile phase as an organic
modifier. AAF was prepared in methanol at a concentration of approximately 0.1 mg mL−1 (Merck, Darmstadt,
Germany, p.a.). The buffer was prepared from 0.02 M Na2HPO4 and 0.01 M citric acid mixed together (Merck,
Darmstadt, Germany, p.a.). Before use, the buffer was vacuum-filtered through a 0.45 μm membrane filter. The
flow rate of the mobile phase was 1 mL min−1. All the measurements were performed at a temperature of 20 °C.
The maximum absorbance of the tested compounds was set at a wavelength λ = 254 nm. The Direct-Q apparatus
(Millipore) provided distilled water. Two minutes before use, micellar mobile phases were degassed in an ultrasonic bath. Each measurement was repeated three times. The retention factors were calculated according to the
formula: k = (tr − t0)/t0, where t0 is the column dead time measured as the retention time of citric acid.
Results
DIC microscopy analysis of C. albicans. The AAF-treated C. albicans cells and the cells from the control
culture were analyzed using the DIC technique. Changes in the C. albicans morphology after incubation with the
different concentrations of AAF and cells in the control culture were observed (Fig. 1a). The control cells shown
in photos A1–A3 were regular, round, with a smooth cell wall.
After incubation with AAF at a concentration of 25 µg mL−1, cell aggregation, cell wall deformations, and
changes in the shape were observed; they are marked with white arrows in pictures B1–B2. In picture B3, the
white arrowheads show cells with enlarged vacuoles and the black arrowheads indicate pseudohyphae. Images
C1–C3 show cells treated with the AAF at a concentration of 50 µg mL−1. The white arrows in Fig. 1a C1 indicate
cells whose wall has lost its integrity, whereas images C2–C3 show deformed cells with clearly enlarged vacuoles
filling almost the entire cells. Figure 1a D1–D3 presents cells incubated with the AAF fraction at a concentration
of 100 µg mL−1. Image D1 highlights a cell division disorder—a chain of cells that are not separated from each
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Figure 1. Morphological and structural changes in C. albicans cells after incubation with AAF for 48 h at
the different protein concentrations. (a) Imaging with CLSM microscopy using DIC; A1–A3—C. albicans
control cells, B1–B3—C. albicans after incubation with AAF at the concentration of 25 µg mL−1; C1, C2—at
the concentration of 50 µg mL−1, D1–D3—at the concentration of 100 µg mL−1. The bars represent 2 µm.
White arrows indicate deformed cells, white arrowheads—cells with enlarged vacuoles, black arrows—chain of
connected cells or debris from broken cells, black arrowheads—hyphae or pseudohyphae. (b) Diagrams showing
the percentage of individual forms of C. albicans cells; A—cells of the control culture, B—C. albicans after
incubation with the AAF at the concentration of 25 µg mL−1; C—at the concentration of 50 µg mL−1, D—at the
concentration of 100 µg mL−1.
other. The white arrows in pictures D2 indicate clearly deformed cells, while the black arrows show remains of
organelles after cell disintegration. Cells with enlarged vacuoles in image D3 are indicated by white arrowheads
and pseudohyphae are designated by black arrowheads. The analysis of the individual forms allows a conclusion
that, as the concentration of the applied fraction increased, the number of forms changed in relation to the cells
of the control culture. The percentage of the four cell forms: normal cells, deformed cells, cells with enlarged
vacuoles, and hyphae and pseudo-hyphae after incubation with 25, 50, and 100 µg mL−1 of the coelomic fluid
fraction is shown in Fig. 1b.
In the control culture, 95% of cells had a correct shape. After incubation with 25 µg mL−1 of AAF, the percentage of cells with normal morphology decreased to 79%, while hyphae and pseudo-hyphae represented 6%,
cells with enlarged vacuoles accounted for 13%, and clearly deformed cells appeared. After the treatment with
50 µg mL−1 of AAF, the proportion of normal cells decreased to 65%, the number of hyphae and pseudo-hyphae
and cells with enlarged vacuoles increased to 13% in each group, and the percentage of deformed cells in the
total pool was 9%. After incubation with 100 µg mL−1 of AAF, 51% of the cells retained their correct shape, 29%
were hyphae and pseudo-hyphae, while deformed cells with enlarged vacuoles accounted for 10% for each form
(Fig. 1b). As a result of disturbed cell division, single chains of cells appeared after incubation with the fraction
at each concentration used.
Microscopy analysis of c. albicans cells after congo Red staining. Changes in the structure of the
cell wall were observed with the use of Congo Red stain after incubation of C. albicans with the increasing concentrations of AAF. The staining results are shown in Fig. 2. The control cells visible in pictures A1–A3 are single
and round and show slight red fluorescence. Photos B1–B2 show cells after incubation with the 25 µg mL−1
concentration of the fraction. Unevenly thickened cell walls can be seen in B1 and B3, while cell deformation is
visible in B2. C. albicans cells incubated at a concentration of 50 µg mL−1 are shown in images C1–C3. In photos
C1 and C2, the whole fungal cells are intensely red. Cells with uneven cell wall thickness are presented in image
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Figure 2. Morphological and structural changes in C. albicans cells after incubation with AAF for 48 h at
the different protein concentrations observed with CLSM microscopy after Congo Red staining; A1, A2—C.
albicans control cells, B1, B2—C. albicans after incubation with AAF at the concentration of 25 µg mL−1; C1,
C2,—at the concentration of 50 µg mL−1, D1, D2—at the concentration of 100 µg mL−1. Bars represent 2 µm.
Intense red glow indicates dye binding to the -glucan in the cell walls.
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Figure 3. SEM image of C. albicans after incubation with AAF for 48 h at the different protein concentrations,
A—C. albicans control cells, B1, B2—C. albicans after incubation with AAF at the concentration of 50 µg mL−1,
C1, C2, C3—at the concentration of 100 µg mL−1. Bars represent 2 µm. Images CB1 and C2 show the collapse of
the cell walls, C1 shows changes in cell wall surface, B2 and C2 show cell wall cracks.
C3. Pictures D1–D3 show C. albicans cells after the treatment with 100 µg mL−1. The aggregated cells in photo
D1 have thicker walls, irregular shape, and round scars left by previous budding on their surface. The fungal cells
in photo D2 are not completely separated from each other, and new buds are visible. In picture D3, there are cells
with irregular cell walls and loss of integrity.
The intensity of red fluorescence increased with the concentration of AAF used and was the highest at
100 µg mL−1. The intensity of glow after staining the fungal cells with the Congo Red fluorochrome was measured
in the control and experimental groups and statistically analyzed. A statistically significant difference was noted
between the fluorescence value of the control sample and the samples incubated with the different concentrations of AAF (25, 50, 100 µg mL−1) (one-way ANOVA (3, 404) = 31.288; p = 0.00) (Fig. 1S). The data distribution
is normal: Levene’s test (3, 404) = 14.52; p = 0.00. The homogeneity of variance was tested using Tukey’s test. In
total, 404 fluorescence values were analyzed statistically.
The control and AAF-treated C. albicans cells were analyzed using
the SEM technique after 48-h incubation. The control cells (A) had regular oval shapes and an undifferentiated
surface of the wall (Fig. 3A). Cells treated with AAF at the concentrations of 50 µg mL−1 and 100 µg mL−1 are
presented in images B1–C3 in Fig. 3. Cells with a clearly rough surface and a concaved wall are visible in Fig. B1.
Image B2 shows cells with altered cell walls and the effect of wall cracking induced by AAF. Images C1 and C2
present deformed cells with an uneven thickened cell wall. In Fig. 3 C1, changes in the daughter cell are clearly
visible in comparison with the control cell in Figs. 1A, and 3 C2 shows aggregated and collapsed cells. Figure 3
C3 shows a cracking cell: the wall is cracked with clearly visible surface roughness and numerous scars left by
cell divisions.
SeM analysis of c. albicans cells.
Changes in the surface of C. albicans cells exposed to AAF were
imaged with the AFM technique. The control culture cell was characterized by regular formation of the cell wall,
and the height profile confirms the rounded symmetrical surface, as shown in Fig. 4 A1, A2. After incubation
with AAF (100 µg mL−1), the cell wall was clearly deformed with a visible collapse in the central part of the cell.
The height profile determined by the analysis of the cell surface has two height peaks forming folds with a distinct depression between them, as shown in Fig. 4 B1, B2.
AfM analysis of c. albicans cell wall.
Cryo‑SEM and AFM analysis of C. albicans surface. The wall surface of the C. albicans control culture
cells and those incubated with AAF (100 µg mL−1 protein concentration) was analyzed using Cryo-SEM and
AFM. At high magnification, the surface of the cell wall in the C. albicans control culture was not quite smooth,
but intensely lumpy, as evidenced by the relief pattern over the entire surface (Fig. 5 A1, B1). After the exposure
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Figure 4. Candida albicans cell wall surface observed with AFM. A1,B1—control culture of C. albicans; A2,
B2—cells after incubation with AAF at the concentration of 100 µg mL−1. A1 and B1 show the shape of the cell
surface, A2 and B2 reflect the height profile of the cells.
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Figure 5. Candida albicans cell wall analysis using Cryo-SEM and AFM. A1, B1—control cells; A2, B2—C.
albicans after treatment with AAF at the concentration 100 µg mL−1. Bars represent 2 µm. Arrowheads show
unevenly thickened cell walls.
to AAF, the cell wall smoothened. Lumps and granules occurred sporadically (Fig. 5. A2 and B2). In addition,
the percentage of surface roughness was determined using AFM. After the incubation with AAF, the roughness
increased threefold compared to the control value. The roughness Ra of the cell wall surface was 2.98 nm in the
control and 9.94 nm after the AAF treatment.
FTIR‑ ATR analysis of C. albicans cells.
To study the effect of AAF on the C. albicans cell wall, FTIR
spectroscopic studies were performed after incubation of the C. albicans fungus with AAF at the protein concentrations of 25, 50, and 100 µg mL−1. Control and AAF-treated cells were analyzed.
The spectroscopic studies of the control cells showed the presence of a characteristic high-intensity band in
the range of 3600–3200 cm−127. This band corresponds to the asymmetrical and symmetrical stretching vibrations
of the O–H and N–H groups (Fig. 6). The presence of a broad band corresponding to OH groups suggests the
presence of fatty acids in the C. albicans control samples, while the presence of NH groups is most likely related
to the presence of amines. The FTIR-ATR spectra also show characteristic bands in the 3000–2850 cm−1 wave
number range derived from the stretching vibrations of the C–H aliphatic groups. The presence of amide bands
in the range of 1650–1515 cm−1 corresponds to the bending vibrations of NH groups and C=O stretching. The
peak at 1539.37 cm−1 corresponds to the bending vibrations of NH groups, while the intense peak at 1635.93 cm−1
corresponds to the stretching vibrations of C=O groups derived from secondary amides. The FTIR-ATR spectra
also showed characteristic bands in the range of 1040–1156 cm−1 corresponding to the polysaccharides present
in C. albicans.
The FTIR spectroscopic studies of AAF-treated C. albicans showed changes in the peak intensity in the range
of wave numbers 1615–1500 cm−1 (Fig. 6). An increase in the intensity of the peak at 1635.93 cm−1 and the peak
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Figure 6. FTIR analysis of C. albicans control cells and cells after incubation with AAT at different protein
concentrations; green—C. albicans control cells, navy blue—C. albicans after treatment of AAF at the
concentration of 25 µg mL−1, brown—50 µg mL−1, blue—100 µg mL−1.
Figure 7. Relationship between logk and CM values obtained using BMC.
at 1539.37 cm−1 characteristic for amide activities was observed. The peak intensity increased proportionally with
the increase in the protein concentration in the AAF fraction, which suggests changes in the chemical structure
of the mannoprotein layer of the C. albicans cell wall after the AAF treatment.
Biopartitioning micellar chromatography (BMc) analysis of AAf. The analysis of the obtained
BMC chromatograms was carried out according to the procedure described in the previous paper27. Two evident peaks were noted in each of the tested systems, suggesting the existence of two substances in the sample.
The relationships between the logarithm of the retention factor (logk) and the micellized surfactant concentration (CM), i.e. the total surfactant concentration minus CMC28, are presented in Fig. 7. Excellent linearity of the
relationships was found over the whole eluent composition range with the correlation coefficient R2 above 0.99.
It allowed extrapolation of logk values. Values extrapolated to pure water logk (denoted as logkw) are considered
an alternative to the logarithm of the n-octanol–water partition coefficient (logPo/w) lipophilicity descriptor. The
obtained logkw values were as follows: for peak 1: – 0.216, for peak 2: – 0.558.
The analysis of the logkw values indicates that both substances are very weakly lipophilic. Moreover, taking into account the molecular weight of the analyte (24 kDa), it can be concluded that such a large molecule
does not penetrate biological barriers. This is in line with Lipinski’s rule of five29. However, to verify this, other
physicochemical parameters of a molecule should be analyzed. According to the Hansch approach, the steric,
electronic, and lipophilic characteristics of a molecule are the most important parameters governing the transport
and drug–receptor interaction30. Moreover, as indicated in numerous studies, the hydrogen-bonding potential
is also an important factor in predicting the ability of a molecule to cross biological barriers31–33.
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Figure 8. (A) Comparison of the elution profiles of the MF-samples on the gel filtration column. Sample
concentration: 1 mg mL−1. Characteristics of the elution profile of the mean MF-sample (at 4 mg mL−1) with
regard to the column calibration (upper part of the graph, values in kDa). Retention times for the major peaks
(values in min) determined automatically using Origin Pro 8 software (Baseline and Peaks function). (B) Times
and calibration function for the column molecular weights of the AAF components.
Retention time (min)
Calc. log(MW)
MW (D)
MW (kDa)
9413
5.15
142,876.2
142.9
13,777
4.39
24,519.6
24.5
15,335
4.12
13,069.0
13.1
18,153
3.62
4187.6
4.2
21,913
2.96
917.2
0.9
Table 1. Molecular masses of peaks shown by the SEC analysis of AAF. Correlation function:
log(MW) = − 0.1754Rt + 6.806.
In the first stage, the chromatographic analysis of AAF involved size
exclusion chromatography. All four tested samples obtained independently were prepared according to the
procedure described in the Materials and Methods section. The superimposed chromatograms are shown in
Fig. 8A. Regardless of the preparation, they all represent the same chromatographic characteristics confirming
the heterogenic nature of AAF.
Based on the determined retention times and calibration function for the column, molecular weights of the
components of AAF were estimated (Fig. 8B and Table 1). Based on the results obtained with the SEC method,
it can be concluded that the main peak corresponds to a 24-kDa protein.
The high heterogeneity of the samples suggested by previous analysis was further confirmed using the UHPLC
approach. The UHPLC analysis of the biologically active fraction in standard conditions revealed the presence
of the main component at around 10 min (Fig. 9). The peak is wide at the base and not entirely symmetrical,
suggesting that it may contain more than one protein/compound. Additionally, other peaks are visible on the
chromatogram before and after the main peak. The multiple peaks present on the chromatogram confirm this
hypothesis. The longer retention time for the main component suggests higher hydrophobicity of this molecule
or higher molecular weight.
Sec and UHpLc analysis of AAf.
To analyze the peptides and proteins present in AAF, we used electrospray ionization mass spectrometry coupled with a chromatographic system (LC–ESI–MS). The sample of
the lyophilized fluid was dissolved in 50 mM ammonium acetate and prepared for MS analysis (see Materials
and Methods). The application of over an hour-long LC gradient allowed separation of peptides and proteins
(Fig. 10) contained in the AAF and determination of the initial mass of most of these compounds (see Tables 1
and 2 and Supplementary materials). The original spectrum and data on the method have been deposited in
the MassIVE repository (see Materials and Methods). The analysis of the total ion chromatogram first shows
a group of intense signals with a retention time between 8 and 15 min (Fig. 10B). It is obvious that it does not
contain a single compound, but rather a group of molecules with similar mass and properties. Reconstruction
of masses in this group is presented in Table 2 and additional drawings are shown in Supplementary materials
intact Lc–eSi–MS analysis of AAf.
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Figure 9. UHPLC chromatogram of the analyzed samples (10 µL injections).
(Figures 2S–6S). In this range, we successfully determined the masses of peptides at 3.6 kDa and 5.1–5.4 kDa as
well as small proteins.
Mainly proteins began to elute after 15 min. The LC gradient with the increasing organic solvent content
yielded a well-separated signal for some proteins, but the proteins eluted in groups in most cases due to the
complex composition of AAF. Even in narrow time windows, it was sometimes difficult to extract m/z signals
for one protein (see Supplementary materials, Fig. 7S–20S). The most confident masses of proteins are presented
in Table 3. The most intense signal at the TIC chromatogram is the peak at 35.86 min, which mainly represents
proteins with masses from 12.2 to 12.5 kDa (Fig. 16S). As demonstrated by the analysis, all protein mass values
reconstructed above 15 min focus in ten main ranges of 9.2–9.9 kDa, 10–10.3 kDa, 11.0–11.1 kDa, 12.3–12.5 kDa,
13.1–13.8 kDa, 16.1–16.4 kDa, 19.7–19.8 respectively kDa, 20.6–20.8 kDa, 21.1–20.8 kDa, and 42.5–43.4 kDa.
Cryo‑TEM analysis of AAF. The Cryo-TEM analysis showed two morphological forms of the preparation
of AAF: a round compact structure with a dark color in the microscopic image (Fig. 11 A1–A3) and a round
loose structure consisting of smaller subunits (Fig. 11 B1–B3). These forms were characterized by light tint in
the image. The smaller forms had a marked tendency to combine into larger structures, which can be clearly
seen in images B1–B3.
Raman spectroscopy analysis of the temperature effect on the AAF protein structure. The
Raman spectroscopy method was effectively used to determine the secondary structure of proteins in our earlier
investigations24. Therefore, in this study, this spectroscopic method was also used for evaluation of the temperature effect on the protein secondary structure. Figure 12a shows an example of a Raman spectrum of proteins
with a labeled Amide I band. The intensity of bands in the Amide I region was used to estimate the alpha helix,
beta sheet, beta turn, and random coil content in the studied material. The curve-fitting process was applied
to estimate the percentage amount of alpha helix, beta sheet, beta turn, and random coil conformations. The
curve-fitting process in the Amide I band region and the position of bands assigned to particular secondary
structures of proteins was shown and described in our earlier study24. Figure 12b presents the Raman spectra of
proteins at different temperatures (from 25 to 165 °C). In these spectra, there are no significant changes in the
protein structure with the increasing temperature. The changes are shown in detail in Fig. 12c,d, which indicate
the percentage changes in the protein secondary structure with the rise in temperature. In Fig. 12c, the content
of proteins in the alpha helix conformation slightly decreases (from about 23% at 23 °C to about 18% at 45 °C),
whereas the content of proteins with the random coil structure slightly increases (from about 14% at 23 °C to
about 17% at 45 °C) with the temperature rise (Fig. 12c). No changes in the content of proteins in the beta turn
and beta sheet conformation are visible between 23 and 45 °C. In a wider temperature range (Fig. 12d) from 25
to 165 °C, the content of proteins with the beta turn and beta sheet structure is maintained as well. In turn, the
content of proteins in the alpha helix conformation decreases (from about 23% at 25 °C to about 5% at 165 °C),
whereas the content of proteins in the random coil structure increases (from about 15% at 25 °C to about 28%
at 165 °C) with the rise in temperature. Moreover, the content of proteins in the alpha helix and random coil
conformation changes abruptly at about 100 °C (Fig. 12d).
Discussion
Natural sources have been very important candidates for the development of new drugs for many years. Compounds of natural origin are a source of various chemical structures often showing the desired biological
activity16. They form a structurally privileged group in the process of binding to specific enzymes, receptors, or
other binding sites and in this way show high affinity for structures found in living organisms.
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Figure 10. Total Ion Chromatogram TIC of AAF intact LC–ESI–MS analysis (A), and zoom on region 8.5 to
15 min (B).
Fungal diseases are a major medical problem, and some types of Candida are resistant to the antifungal
antibiotics used to date. C. albicans is the most common fungus causing infection in humans. AAF has been
identified as a protein–carbohydrate fraction from D. veneta earthworm CF with antifungal activity against
C. albicans, C. krusei strains24, and A549 lung cancer cells with approximately 90% cytotoxicity in vitro34. It is
important that AAF showed no cytotoxicity effect on normal bronchial epithelium BEAS 2B cells. In addition,
AAF exhibited selective cytotoxic action against colorectal cancer cells35. In both Candida and tumour cells, AAF
caused cell death via apoptosis and necrosis. Our previous research on the earthworm D. veneta showed that
the symbiotic bacterium associated with the intestine of earthworms Raoultella ornithinolytica was capable of
producing metabolites with antifungal activity against C. albicans36 and had anti-cancer activity against ovarian
cancer line TOV-112D and breast ductal carcinoma T47D37. The effect of the AAF fraction on C. albicans cells
was stronger than that of a polysaccharide–protein complex from R. ornithinolytica metabolites, with induction
of a visible process of apoptosis that had not been observed earlier24. Therefore, this trend in the search for a
potential pharmaceutical with anti-fungal and anti-cancer effects seems to be relevant.
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Peptides and proteins masses identified in intact ESI–MS analysis—TIC 9–13 min
3601.4
4084.7
5107.3
7555.2
8000.7
9511.1
3603.5
4764.0
5163.1
7586.1
8352.8
9526.4
5379.5
7620.1
9550.3
15,456.3
5406.4
7645.5
9551.7
15,550.4
5443.8
7669.3
9552.0
5466.5
7697.1
9569.2
5485.3
7709.0
9585.5
5858.4
7728.6
9597.8
5947.6
7734.2
9613.8
5952.0
7858.2
9614.4
5967.1
7895.6
9670.1
5998.1
7922.1
3606.1
6804.2
10,909.6
13,216.7
15,203.9
16,670.7
15,242.4
7950.7
Table 2. Masses reconstructed in intact LC–ESI–MS analysis in the TIC range 9 to 13 min. The masses of
most abundant identified proteins and peptides are marked in bold (for particular reconstructs of masses—see
Supplementary materials Figs. 3–7S).
Protein masses identified in intact ESI–MS analysis—TIC 16–70 min
9299.9
10,030.3
11,079.8
12,326.2
13,131.6
16,188.7
19,757.5
20,661.9
21,167.1
42,477.0
9942.7
10,130.7
11,092.8
12,388.2
13,375.3
16,215.7
19,767.2
20,664.1
21,591.2
43,369.0
9987.5
10,330.0
11,137.9
19,794.8
20,741.4
12,470.5
13,492.8
16,258.4
12,484.5
13,675.6
16,358.6
13,832.5
21,621.3
21,634.1
21,757.3
Table 3. Masses reconstructed in intact LC–ESI–MS analysis in the TIC range 15 to 70 min. For particular
masses reconstructs—see Supplementary materials Figs. 8S–20S.
Many clinical observations conducted for years show a link between cancers and Candida fungus infections.
There is evidence that C. albicans infection increases the risk of cancer and metastasis. In particular, this opportunistic pathogen exploits the state of immunosuppression in chemotherapy patients. Candida can cause cancer
through such mechanisms as production of carcinogenic by-products, induction of inflammation, induction of
Th17 responses, and molecular mimicry38. C. albicans is able to elicit an inflammatory response that increases
the adhesion of cancer cells to the liver endothelium, which was found in in vitro studies39. Oral candidiasis is
the most common opportunistic fungal infection and has been associated with pre-cancer and cancer. Candida
is involved in lung cancer, which is one of the most prevalent neoplastic diseases in the world. Thus, the search
for a compound with a bi-directional effect on candidiasis and cancer without a clear cytotoxic effect on normal
cells is well founded and worth developing and exploring.
Our research indicates that AAF acts on the C. albicans cell wall. The structural integrity of the cell wall of C.
albicans is necessary for the survival and reproduction of yeast. The damaged cell wall causes osmotic disorders
in the fungal cell, rupture of the cell membrane, and, consequently, outflow of cytoplasmic content and cell
death40. The C. albicans cell wall is a very important cell element playing a key role in determining the balance
between commensalism and disease. Cell wall proteins represent many virulence attributes of pathogens, and
cell wall carbohydrates act as PAMPs, which induce both immune defence and potential overactivation of the
inflammatory response41. C. albicans is able to reduce its detection by the body’s immune system through masking the β-(1,3)-glucan present in the inner cell wall by an outer layer made of glycosylated mannoproteins. The
β-(1,3)-glucan layer can be unmasked by mutations, drugs, or bioactive compounds that destroy the cell wall.
This leads to detection of Candida by immune cells by the Dectin-1 receptor and C-type signalling lectin42,43.
Glucan together with chitin are structural components of the fungal cell wall responsible for the integrity and
physical strength of this structure. The production and assembly of glucan in C. albicans requires a number of
enzymes and mechanisms that are characteristic only for fungi. The process of building the fungal cell wall is an
interesting target for antifungal therapies44. Caspofungin and micafungin are the best-known antifungal antibiotics inhibiting β-(1–3)-glucan synthesis; however, mutations in β-(1,3)-glucan synthesis that confer resistance to
caspofungin have already been observed. The mechanism of action of AAF is probably based on the exposure of
β-(1,3)-glucan in C. albicans cells, which was demonstrated using the Congo Red staining in the present study.
This property predisposes this compound for assessment of its potential as an antifungal antibiotic.
The most commonly used antibiotic acting on the Candida cell wall is amphotericin B, i.e. a polyene antibiotic
from the group of heptaenes produced by Streptomyces nodosus. The mechanism of action of amphotericin B is
based on binding the drug to sterol-containing fungal cell membranes and changing their permeability44. The
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Figure 11. Cryo-TEM analysis of AAF. A1–A3: morphological forms with a compact structure, B1–B3:
morphological forms with a loose structure, visible aggregation of smaller forms into agglomerates.
clinical use of amphotericin B has many side effects, such as nausea, vomiting, fever, hypokalemia, hypomagnesemia, and kidney or liver damage. Studies on the effects of amphotericin B on the same C. albicans strain as in
the AAF study have demonstrated that the antibiotic is able to bind to groups of polar sugar monomers present
in the cell wall, which leads to cell wall coating. The experiment has also shown that the drug caused an AAFlike effect in fungal cells, e.g. cell collapse, cell wall thickness and structure disorders, budding scars, and cell
elongation45. Similar changes in the C. albicans cells have also been observed in our Cryo-SEM and AFM experiments following the AAF treatment. After the incubation with AAF, the fungal cells walls were irregular and had
varying thickness. The cells collapsed and the wall surface roughness changed, which was evident in the AFM
images. Morphologically changed cells were observed by light microscopy using DIC. After the application of
the active fraction at the concentration of 100 µg mL−1, changed cells constituted 49% of all imaged cells. While
describing their morphology, it should be remembered that maintaining a regular shape is not synonymous with
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Figure 12. Raman spectroscopy analysis. Raman spectrum of proteins with a labeled Amide I band (a); Raman
spectra of proteins collected at different temperatures (b); changes in the percentage content of the particular
secondary structures of proteins from 23 to 45 °C (c) and from 45 to 165 °C (d).
maintaining proper metabolism, which was shown in the images in earlier studies24. Metabolically inactive or
dead cells may also appear morphologically normal. The presence of altered cells is the result of a clear response
to the applied stress factor.
To check whether AAF binds to the C. albicans cell wall, FTIR analyses of C. albicans control cells and AAFtreated cells was performed. The increase in the intensity of the band at 1636 cm−1 and the band at 1539 cm−1
suggests an increase in the number of C=O groups and NH groups derived from amide compounds. This may
be related to the attachment of the AAF-derived protein fraction to the C. albicans cell wall, as evidenced by
SEM and Cryo-SEM microscopy. A local increase in the cell wall thickness was clearly visible in the microscopic
images. Local layering of AAF-derived substances on C. albicans cells can be assumed. The FTIR spectroscopic
studies suggest the protein or peptide nature of the substance attached to the outer cell wall of the fungi.
To confirm our assumptions about the mechanism of the AAF interaction with C. albicans cells, we decided to
check the permeability of AAF through the biological barrier. Biopartitioning Micellar Chromatography (BMC)
is one of the non-cell based in vitro methods. BMC systems are considered to mimic the biological environment
due to their similarity to biological barriers and extracellular fluids; therefore, they are useful in describing e.g.
intestinal absorption, skin permeability, blood–brain barrier penetration, etc.33,46–48. Moreover, BMC is often
used to determine the lipophilicity of various compounds49. The study results indicate poor lipophilicity of the
tested fraction and suggest its impermeability through biological barriers; therefore, the cell wall is considered
the target of AAF.
The observations correspond to the results obtained after Cryo-TEM and MALDI analysis indicating a complex structure of AAF. The images of AAF after the Cryo-TEM analysis suggest that the compound is polymeric
in nature. One of the forms clearly forms larger agglomerates, creating a spherical structure consisting of many
separate subunits. Most likely, such a complex structure causes impermeability through the cell membrane.
The intact LC–ESI–MS approach is the next step undertaken to obtain as much information as possible on
the peptide–protein composition of AAF. In our previous study, intact MALDI analysis in three matrices (SA,
sDHB, and DHB) gave a preliminary picture of peptides and proteins with masses from 5 to 44 kDa present in
the examined sample. The intact LC–ESI–MS analysis presented in this study allowed accurate determination of
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the masses of molecules present in AAF. These results are consistent with previous MALDI analysis performed
in the range of 5–90 kDa; analogous signal groups are visible in both cases.
With the use of the LC–ESI–MS analysis, we were able to identify masses below 5 kDa (3.6 and 4.0, 4.7 kDa,
Table 1), which indicates the presence and potentially important role of the peptide components of AAF in the
biological activity. It is, therefore, necessary to study further the peptides contained in this fluid, which may
reveal new biologically active compounds. We identified a group of small proteins with a mass of 7–8 kDa. Their
signals were well separated on the chromatographic column, and we were able to designate their masses with high
accuracy (Table 1). The next step will aim to establish whether they are separate molecules with different amino
acid sequences or a group of two–three small proteins with modifications (acetylation/methylation/oxidation).
This problem will be addressed in the planned Top-down analysis. Despite the complex nature of the preparation,
we were able to determine successfully the mass of proteins in the range of 9 to 14 kDa. We easily assigned the
charge states to specific m/z values in the spectrum, which allowed us to perform mass reconstruction (Table 2,
Figs. S6-S19). With great success, we were also able to separate proteins, which in the intact MALDI analysis
occurred in the form of broad signals or completely unseparated groups with m/z from 15 to 44 kDa. We identified with good accuracy approximately 17 proteins present in the preparation with the use of the electrospray
technique combined with chromatographic separation. Only proteins in the range of 30–35 kDa and above
50 kDa were not identified in the intact ESI analysis. Most likely, their concentration in the sample is low and
they eluted at the end of the LC gradient, or other better ionizing molecules suppressed their m/z signals. In
this case, fractionation of the examined fluid has to be performed to simplify the sample composition. It is also
worth noting that some of the identified masses are represented by one clear signal in the spectrum showing the
reconstructed masses. However, many of the proteins occur in the form of several masses, between which the
differences are in the range of 16–100 Da, which indicates the presence of different isoforms of a given protein.
These may be methylation, formylation, or oxidation (e.g. methionine) modifications, as well as the presence
of sugar residues, which were detected in the preparation previously. In the next investigations, we plan to
fractionate the preparation and carry out accurate identification of protein and peptide components combined
with Top-Down MS analysis and de-novo sequencing, which will allow identification of specific proteins and
assignment to particular identified masses.
In the pharmaceutical industry, it is important that any exothermic or endothermic processes that occur during the manufacture of drugs should be examined using thermal analysis methods. During the analysis of the
substance, it can be determined whether the compound undergoes changes during preparation of the formulation. These changes have a major impact on the later use of production methods and formulation of the drug.
The Raman spectroscopy analysis showed that the AAF fraction did not change its chemical structure under the
influence of elevated temperature, which indicates the applicability of the fraction as a preparation.
In the light of the analysis of both C. albicans cells after the exposure to AAF and the fraction itself, it can be
concluded that the fraction from CF acts on C. albicans cells by lowering their metabolic activity and causing
apoptotic cell death by a direct effect on the cell wall, which was demonstrated in earlier research24. The changes
in cell morphology and disorders of cell division reported in this study, similar to those caused by the action of
amphotericin B, are a result of attachment of the complex proteins to the cell wall and initiation of a series of
phenomena leading to cell death.
Antibiotics acting on the fungal cell wall (echinocandins) and cell membrane (azoles, allylamines, or amorolfine) cause side effects that cover a wide range of symptoms. These undesirable effects limit the use of these
antibiotics, and the current situation requires development of new drugs with less harmful effects. We hope that
the AAF obtained from earthworm CF will not show such toxic properties; therefore, it will be able to replace
the antibiotics mentioned above. Due to the high antifungal50 and anti-cancer51,52 activity of AAF and no signs
of endotoxicity and cytotoxicity towards normal human cells, AAF has been patent pending in Poland, and
research into the exact mechanism of this action will be continued.
In conclusion, mycoses are very serious and chronic diseases, and their treatment is difficult and long-lasting. The incidence of fungal infections has increased significantly in recent years. The development of surgical
techniques and methods of intensive medical care creates situations favorable for the development of fungal
infections, and C. albicans causes over 80% of fungal diseases. The difficulties in the treatment of candidiasis
and the numerous side effects of the antibiotics used prompt the search for new compounds that do not exhibit
endotoxicity and, at the same time, are effective against C. albicans cells. Exploitation of the potential of earthworms living in an environment rich in fungi seems to be a good way to obtain an effective drug. The obtained
compound will be tested in a mouse model in order to analyze fully its immunological parameters and applied
in clinical trials in the case of successful results.
Data availability
All data generated or analyzed during this study are included in this article (and its Supplementary Information
files).
Received: 2 March 2020; Accepted: 8 September 2020
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Acknowledgements
We would like to thank MSc Jerzy Wydrych from Deprtment of Functional Anatomy and Cytobiology for help
in fluorescent microscopy.
Author contributions
M.J.F, S.M., performed the light and fluorescent microscopy, SEM, prepared samples for chemical analysis, for
Cryo-SEM, Cryo-TEM and AFM, developed the results obtained and wrote the main manuscript text, performed
the statistical analysis, prepared Figs. 1, 2, 3, 4, 5, 6, 11, P. C. and A. S. performed size exclusion chromatography
(SEC) analysis, UHPLC analysis of AAF, and Intact LC–ESI–MS analysis, wrote the main manuscript text and
prepared Figs. 8, 9, 10, Tables 1, 2, 3, Figs. 2S–20S of supplementary materials, K.S., performed Biopartitioning
Micellar Chromatography (BMC) analysis and prepared Fig. 7, W.S.C. performed FTIR analysis and prepared
Fig. 6, T. B. performed Raman spectroscopy analysis and prepared Fig. 12, K.L. performed the analysis of the
morphological forms of C. albicans cells, measured the fluorescence of fungal cells, and prepared Fig. 1b and 1S.
All authors reviewed the manuscript.
competing interests
The authors declare no competing interests.
Additional information
Supplementary information is available for this paper at https://doi.org/10.1038/s41598-020-73044-w.
Correspondence and requests for materials should be addressed to M.J.F.
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